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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs71495048 chr10:34013633 C/T GAGE2D chrX:49207160-49214420:+ 0.58 7.54 6.75E-10 Box Plot
ACC rs71495049 chr10:34014435 G/A GAGE2D chrX:49207160-49214420:+ 0.59 7.7 3.86E-10 Box Plot
ACC rs71614196 chr3:40335771 A/G PRHOXNB chr13:28552243-28562774:- 0.63 8.21 5.93E-11 Box Plot
ACC rs7166504 chr15:73905752 A/G PRHOXNB chr13:28552243-28562774:- 0.6 8.06 1.02E-10 Box Plot
ACC rs71728311 chr13:54766068 TTATC/T OR5V1 chr6:29323007-29399744:- 0.67 9.04 2.99E-12 Box Plot
ACC rs7173091 chr15:99978128 C/A PRHOXNB chr13:28552243-28562774:- 0.62 7.95 1.52E-10 Box Plot
ACC rs71732503 chr13:105323354 GT/G PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs7208021 chr17:39336064 A/G OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs7212376 chr17:39336342 A/G OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs7213314 chr17:66685847 C/T C2orf57 chr2:232457575-232458994:+ 0.75 7.56 6.38E-10 Box Plot
ACC rs72138365 chr1:225862886 A/AAT GPR128 chr3:100328433-100414323:+ 0.77 7.7 3.78E-10 Box Plot
ACC rs7216682 chr17:32519739 G/A TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs7219058 chr17:51932079 C/T PRHOXNB chr13:28552243-28562774:- 0.53 7.52 7.3E-10 Box Plot
ACC rs7225833 chr17:39336167 G/T OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs7228776 chr18:70149733 A/G PTPLAD1 chr15:65822756-65870687:+ -1.21 -7.64 4.66E-10 Box Plot